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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs67652222 chr6:27586220 C/T RNF5P1 chr8:38458179-38458718:- 0.68 5.9 7.05E-9 Box Plot
THCA rs67652222 chr6:27586220 C/T ZFP57 chr6:29640169-29648887:- 0.9 8.51 2.31E-16 Box Plot
THCA rs67662114 chr6:27932301 G/A BTN3A2 chr6:26365387-26378548:+ -0.84 -11.97 4.55E-29 Box Plot
THCA rs67662114 chr6:27932301 G/A RNF5P1 chr8:38458179-38458718:- 0.72 6.32 6.1E-10 Box Plot
THCA rs67662114 chr6:27932301 G/A ZFP57 chr6:29640169-29648887:- 0.94 8.94 8.25E-18 Box Plot
THCA rs67664163 chr7:65085749 GA/G RABGEF1 chr7:66147151-66276451:+ -0.49 -9.84 6.37E-21 Box Plot
THCA rs6767081 chr3:179571442 A/G PHF11 chr13:50069746-50103123:+ -0.23 -6.34 5.29E-10 Box Plot
THCA rs6768005 chr3:125742272 A/G ROPN1 chr3:123687368-123711025:- -0.33 -5.94 5.39E-9 Box Plot
THCA rs67718113 chr1:121238910 C/T NBPF14 chr1:148003642-148025863:- -0.4 -8.86 1.52E-17 Box Plot
THCA rs67743209 chr1:174931786 TTAGAG/T SERPINC1 chr1:173872942-173886516:- 0.73 8.83 2.04E-17 Box Plot
THCA rs6775613 chr3:125817732 T/C ROPN1 chr3:123687368-123711025:- -0.35 -6.34 5.31E-10 Box Plot
THCA rs6776967 chr3:90025022 A/G STX19 chr3:93733213-93747454:- -0.44 -6.24 9.46E-10 Box Plot
THCA rs67777156 chr6:26633711 T/A RNF5P1 chr8:38458179-38458718:- 0.74 6.36 4.72E-10 Box Plot
THCA rs67777156 chr6:26633711 T/A ZFP57 chr6:29640169-29648887:- 0.84 7.72 6.97E-14 Box Plot
THCA rs67777156 chr6:26633711 T/A ZNF389 chr6:28129551-28137375:+ -0.62 -5.95 5.11E-9 Box Plot